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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930991.1_cds_XP_016477932.1_69618
CDS Infomation

[gene=LOC107799344] [db_xref=GeneID:107799344] [protein=phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like] [protein_id=XP_016477932.1] [location=complement(join(53527..53577,53655..53709,54624..54749,54825..54891,55079..55150,55769..55865,55955..56051,56149..56233,56306..56382,57058..57096,57260..57297,57420..57510,58845..58937,59053..59108,59272..59328,59999..60091,60207..60329,60945..61091))] [gbkey=CDS]
Sequence

ATGGCGGAAGACGCTATACTCGGATTTCTTGAAAAGAACGACGAGATTTCAGATTCTTTT
AAATTTGCGGAACAACATGGGTTCCTCCACGAGGAGATTGTCAATGTTATCCGCAGCCTC
AATGGTTTTAGATTTGTTGATGCTCAGGATATTAAGAGAGAGAGATGGGTGCTTACTGAA
GAGGGGAAAACCTATGCTTCCGTAGGTTCTCCAGAATTTCAGCTTTTCTCAGCAGTACCA
CCGGAAGGAATTGCGCGGGAGGAGTTGCAGAAAAAGTTGGATCCTGCAGTTTATAAAATT
GGTTGCCAGCAAGCTATAAAGAACAAGTGGGTGGAGATGGCAAAGACTCAAGTTTCAAGG
AAGGTCCAACATGCTGATGATAAAGTTAAAGATTCACTCTTGAGGATACAAAATGGCGAG
GCTGTCAATCAGGAGGATATTGATGCTCTAAAGCGCCGAAAGCTAATAAGTCAGCAGGTT
TGGAAAGGAAACTCAGTGAGAAAAGGTCCTAACTATGCTCCTAAAAGGAAAAGAGCCGCA
ACTGATCTAACTCGTGAAAACCTACAGAGGGGTGACTGGAAGGAATTGGAATTTAAAGAG
TATAACTTCAGTGCTAAAGGTCAGCCAGTTGAAGGTGGCCATCTTCATCCATTGCTCAAG
GTTAGGCGGCAGATACAAATGATTTTTCTTAATATGGGGTTTGAGGAGATGCCAACAAAT
AACTATGTCGAAAGCAGTTTTTGGAACTTCGATGCACTCTTCCAGCCACAACAGCACCCT
GCCCGTGATTCCCATGATACATTCTTTTTGAAAGTCCCTTCCACTTCAAAGATGCTGCCA
GAAGAGTATGTTGAGCGGGTAAAACAAGTTCATGAATCTGGTGGTTACCAGTCTAGGGGA
TATGGGTATGATTGGAAAAGAGAGGAAGCAAACAAGAATCTTTTGCGGACACACACTACT
GCTGTTTCGTCAAGAATGTTGTGCGCATTAGCTCAGAAGCCCTTTGCCCCCAAGAAATAC
TATTCTATTGATCGTGTTTTCAGAAATGAAGCAGTTGATCGGACACATCTTGCTGAATTT
CACCAGATAGAAGGCTTAATATGTGATCGTGGACTTACTCTTGGTGACCTGATTTGTGTT
CTTCATGACTTCTTTGCTCGTCTAGGAATGTCCAAGCTTCGGTTCAAACCTGCGTATAAT
CCTTATACTGAGCCCAGCATGGAAATTTTCAGCTACCATGAAGGCTTAAAGAAATGGGTG
GAAGTTGGGAATTCTGGTATGTTTAGGCCTGAAATGCTGCTTCCTATGGGGCTGCCAGAA
GATGTTCGGGTTATTGCATGGGGCCTTTCCCTTGAGAGGCCCACCATGATTCTCTACGGG
ATTGACAATATCAGAGATCTTTTTGGTCCTAAGGTGGATATAGGTCTCATCAAAAGAAAT
CCAATATGCCGGCTTGGGATTTAG

Peptide Sequence

PEP ID

XP_016477932.1
PEP Infomation

PREDICTED: phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like [Nicotiana tabacum]
Sequence

MAEDAILGFLEKNDEISDSFKFAEQHGFLHEEIVNVIRSLNGFRFVDAQDIKRERWVLTE
EGKTYASVGSPEFQLFSAVPPEGIAREELQKKLDPAVYKIGCQQAIKNKWVEMAKTQVSR
KVQHADDKVKDSLLRIQNGEAVNQEDIDALKRRKLISQQVWKGNSVRKGPNYAPKRKRAA
TDLTRENLQRGDWKELEFKEYNFSAKGQPVEGGHLHPLLKVRRQIQMIFLNMGFEEMPTN
NYVESSFWNFDALFQPQQHPARDSHDTFFLKVPSTSKMLPEEYVERVKQVHESGGYQSRG
YGYDWKREEANKNLLRTHTTAVSSRMLCALAQKPFAPKKYYSIDRVFRNEAVDRTHLAEF
HQIEGLICDRGLTLGDLICVLHDFFARLGMSKLRFKPAYNPYTEPSMEIFSYHEGLKKWV
EVGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGIDNIRDLFGPKVDIGLIKRN
PICRLGI

Transcript Sequence

Gene sequence data has not been registered.